SMB DIGEST 
ISSN 1086-6566
VOLUME 17 ISSUE 21
MAY 25, 2017

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Issue's Topics:  
  
  Helsinki Summer School on Mathematical Ecology and Evolution 2018
  Theory & Practice of Natural Computing, Dec 18-20, Prague
  NETTAB 2017 workshop, Oct 16-18, Palermo
  MSc in Mathematical Medicine and Biology, University of Nottingham
  PhD position: Biological oscillators, Inria
  PhD position: Mathematical immunology, Dundee
  PhD Position: Computational Biology, Frankfurt
  Postdoc: Bioinformatics, Queen Mary University of London
  NSF-Simons Research Centers for Mathematics of Complex Biological Systems
  SMBnet Reminders


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From: Eva Kisdi <eva.kisdi@helsinki.fi> via helsinkifi.onmicrosoft.com
Date:Tue, May 23, 2017 at 1:20 PM
Subject: Helsinki Summer School on Mathematical Ecology and Evolution 2018

Dear Colleagues,
 
We are glad to announce the 2018 edition of The Helsinki Summer School on
Mathematical Ecology and Evolution, an EMS-ESMTB School in Applied
Mathematics. The school will be held next year, between 19 and 26 August 2018
in Turku, Finland, and will be part of the EMS Year of Mathematical Biology.
 
The application period will start in late 2017. For more information, see the
school's webpage
https://wiki.helsinki.fi/display/BioMath/The+Helsinki+Summer+School+on+Mathematical+Ecology+and+Evolution+2018


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From: GRLMC <grlmc@grlmc.com>
Date: Sun, May 21, 2017 at 9:57 PM
Subject: CfP: Theory & Practice of Natural Computing, Dec 18-20, Prague

6th INTERNATIONAL CONFERENCE ON THE THEORY AND PRACTICE OF NATURAL COMPUTING
Prague, Czech Republic
December 18-20, 2017

For further details, see:
http://grammars.grlmc.com/TPNC2017/


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From: Romano Paolo <paolo.romano@hsanmartino.it>
Date: Thu, 25 May 2017 11:26:51 +0200
Subject: NETTAB 2017 workshop, Oct 16-18, Palermo

Here are the most recent news on next NETTAB 2017 workshop on "Methods, tools
& platforms for Personalized Medicine in the Big Data Era", Palermo, 16-18 O
ctober 2017.

Due to many requests, the deadline for the submission of abstracts for oral
communication has been postponed until Friday June 9, 2017.

We welcome four-page abstracts on all workshop topics. See
http://www.igst.it/nettab/2017/submissions/topics/ .

Submission instructions at
http://www.igst.it/nettab/2017/submissions/instructions-for-authors/ .

See all keynote talk abstracts at
http://www.igst.it/nettab/2017/programme/speakers/ .

See guest talk abstracts at
http://www.igst.it/nettab/2017/programme/speakers/ .

The list of tutorials is now available at
http://www.igst.it/nettab/2017/programme/tutorials/ .


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From: Ruediger Thul <Ruediger.Thul@nottingham.ac.uk>
Date: Wed, May 24, 2017 at 3:10 PM
Subject: MSc in Mathematical Medicine and Biology, University of Nottingham

The MSc in Mathematical Medicine and Biology at the University of Nottingham
is open for applications to start in September 2017.

The MSc in Mathematical Medicine and Biology prepares students to pursue
successful careers in either academia or industry. As such, it provides an
excellent first step towards embarking on a PhD in Mathematical Biology or
towards working for companies in areas like drug development, healthcare, or
sustainable agriculture.

The programme provides training in advanced mathematical techniques including
partial differential equations and stochastic processes. Moreover, it exposes
students to a broad variety of biological and medical applications, ranging
from subcellular processes such as gene regulation to organ-level dynamics.
In particular the MSc offers practical experience in modelling dynamics in
neuroscience, cardiac dynamics, cancer, inflammation and plants. Overall the
MSc in Mathematical Medicine and Biology is an interdisciplinary postgraduate
degree that combines exciting mathematical research areas with a wide range of
practically relevant biological and medical questions.

The programme currently offers 5 taught modules, which is followed by a
dissertation. During the taught portion of the course students are introduced
to key modelling concepts and numerical approaches in Mathematical Biology. In
addition, advanced mathematical techniques are covered that allow students to
successfully engage with today's challenges in biology and medicine. The
dissertation provides students with an exciting opportunity to study a
specific topic in more detail. Here, the wide range of interests and expertise
within the research group of Mathematical Medicine and Biology at the
University of Nottingham give students a great experience with hands-on
research.

For more information, please go to
http://www.nottingham.ac.uk/pgstudy/courses/mathematical-sciences/mathematical-medicine-and-biology-msc.aspx


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From: Madalena Chaves <madalena.chaves@inria.fr>
Date: Mon, May 22, 2017 at 11:43 AM
Subject: PhD position: Biological oscillators, Inria

PhD thesis position at Inria:
Mathematical analysis, control design and coupling for models of biological
oscillators

To learn more about the project and related PhD positions please check:
https://project.inria.fr/icycle/phd-offers/

Applications accepted until June 12th.
Please send an email to madalena.chaves@inria.fr, with CV and names of two
references.
The PhD thesis will be supervised by Madalena Chaves at Inria Sophia Antipolis
and funded by ANR.


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From: Raluca Eftimie <reftimie@maths.dundee.ac.uk>
Date: Fri, May 19, 2017 at 4:08 PM
Subject: PhD position: Mathematical immunology, Dundee

A fully-funded 3.5yrs PhD Studentship in Mathematical Immunology is available
at the University of Dundee, UK

Project title: Quantitative investigation of the PI3K signalling pathway in T
cell biology

For further details and to apply: please contact Dr Eftimie
(r.a.eftimie@dundee.ac.uk) or follow the link:
http://www.lifesci.dundee.ac.uk/phdprog/phd-studentships/phd-projects/35-year-mrc-phd-programme-quantitative-investigation-pi3k


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From: Esteban Vargas <vargas@fias.uni-frankfurt.de>
Date: Tue, May 23, 2017 at 11:34 AM
Subject: PhD Position: Computational Biology, Frankfurt

The group of Systems Medicine at the Frankfurt Institute for Advanced Studies
invites applications for a full-time PhD position in Computational biology.
The successful candidate will receive a scholarship for 3 years.

Major duties:
* Develop mathematical models describing diseases using deterministic models,
  stochastic models, and compartmental models.
* Analyze clinical and experimental data from collaborators using machine
  learning and bioinformatics approaches.
* Develop novel algorithms to treat diseases.
* Publish research findings in scientific journals and present them at major
  scientific meetings.
 
Qualifications:
* A bachelor/MSc degree in a quantitatively-oriented field, such as
  engineering, computer science or applied mathematics.
* Excellent command of English.
* Knowledge in analytical and quantitative methods.
* Experience in MATLAB or R, and LaTex.
* Knowledge of immunology is a plus.
 
Please send questions or your application with a motivation letter, outlining
your interest in a PhD position, along with your curriculum vitae which should
include the names and contact details of three referees, to
vargas@fias.uni-frankfurt.de

Further research details at http://systemsmedicine.de/

Positions are open until filled. The planned start date is in August 2017 but
can be negotiated.


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From: Gabriel Rosser <gabriel.rosser@gmail.com>
Date: Mon, May 22, 2017 at 10:57 AM
Subject: Postdoc: Bioinformatics, Queen Mary University of London

A Postdoctoral Research Assistant position is available on the epigenetics of
the brain tumour glioblastoma. The project is a close collaboration with
experimentalists and is led by PI Prof Silvia Marino at the Blizard Institute.
The appointee will work with a wide variety of next generation sequencing
data, applying existing statistical approaches and developing new integrative
analysis methods to gain insight into the epigenetic mechanisms underlying
this aggressive disease. Option to gain experience of experimental techniques
if desired, but not necessary.

Detailed information is available at
https://webapps2.is.qmul.ac.uk/jobs/job.action?jobID=2073
http://biology.nd.edu/about/employment/postdoctoral-research-in-mathematical-and-computational-modelling-of-neglected-tropical-diseases/


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From: Henry Warchall <hwarchal@nsf.gov>
Date: Wed, May 24, 2017 at 2:10 PM
Subject: NSF-Simons Research Centers for Mathematics of Complex Biological Systems

Dear Colleagues,

A new NSF program solicitation (NSF 17-560) is now available:

   NSF-Simons Research Centers for Mathematics of Complex Biological Systems

Please see

   http://www.nsf.gov/funding/pgm_summ.jsp?pims_id=505392

for details.

Letter of Intent (required) Due Date: August 10, 2017
Full Proposal Deadline Date: September 29, 2017


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Subject: SMBnet Reminders


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