----------------------------------------------------
Subject: Society for Mathematical Biology Digest

SMB Digest  September 30, 2014  Volume 14  Issue 40
ISSN 1086-6566

Editor: Ray Mejía ray(at)smb(dot)org

Note:
Information about the Society for Mathematical Biology, including an
application for membership, may be found in the SMB Home Page,
http://www.smb.org/ .

Access the Bulletin of Mathematical Biology, the official journal of SMB, at
http://www.springer.com/11538 .

Inquiries about membership or BMB fulfillment should be sent to
membership(at)smb(dot)org .

Issue's Topics:
   CfP: Ecological and Molecular mOdeling of infecTIONS - EMOTIONS 2014
   BIOMATH 2015, 6/14-19, South-West University, Blagoevgrad
   Scholarships Available for Keystone Symposia Plant Biology Conferences
   Postdoctoral Position, Modelling Dynamics of Infectious Diseases ...
   Postdoctoral Position, Infectious Disease Modeling, St. Jude
   Postdoctoral Position/Senior Modeller, Newcastle University
   Research Assistant Professor & Postdoctoral Research Fellow, U Tokyo
   Postdoctoral Position, Mathematical Biology Education, QUBES Project
   Research Associate\Educator, University of Maryland
   Tenure-Track/Senior Positions, Stat/Comput Appl Math, EPF Lausanne
   Faculty Position, Applied Mathematics, NCSU
   Tenure-Track Positions, Mathematical Biology, University of Kentucky
   SMBnet Reminders


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From: NAIGLIN LAURENCE <laurence.naiglin@univ-lyon1.fr>
Date: 2014-09-26 5:40 GMT-04:00
Subject: CfP: Ecological and Molecular mOdeling of infecTIONS - EMOTIONS 2014

Bonjour,
Le colloque scientifique international EMOTIONS - «Ecological and Molecular
mOdeling of infecTIONS» (http://emotions2014.sciencesconf.org/), organisé
par le Laboratoire d'Excellence ECOFECT - dynamiques éco-évolutives des
maladies infectieuses (http://ecofect.universite-lyon.fr/)  aura lieu les
10 et 11 décembre 2014 à Lyon.
Un appel à résumés de posters est lancé jusqu'au 31 octobre 2014.


Hello,
The international scientific colloquium EMOTIONS
2014 - 'Ecological and Molecular mOdeling of infecTIONS'
(http://emotions2014.sciencesconf.org/?lang=en), organized by the laboratory
of Excellence ECOFECT - eco-evolutionary dynamics of infectious diseases
(http://ecofect.universite-lyon.fr/home-212946.kjsp?RH=ECOFECT&RF=ECOFECT-EN)
will take place on December 10th and 11th, 2014 in Lyon.
A call for posters presentations is open until October 31st, 2014.


----------------------------------------------------

From: Roumen Anguelov <Roumen.Anguelov@up.ac.za>
Date: Sat, Sep 27, 2014 at 8:33 AM
Subject: BIOMATH 2015, 6/14-19, South-West University, Blagoevgrad

2015-06-14 - 2015-06-19
BIOMATH 2015: International Conference on Mathematical Methods and Models in
Biosciences, University Centre Bachinovo, South-West University, Blagoevgrad,
Bulgaria

The conference is devoted to recent research in life sciences based on
applications of mathematics as well as mathematics applied to or motivated by
biological studies. It is a multidisciplinary meeting forum for researchers
who develop and apply mathematical and computational tools to the study of
phenomena in the broad fields of biology, ecology, medicine, biotechnology,
bioengineering, environmental science, etc. Contributed talks in any of
these fields are invited. Abstracts deadline: 30 March 2015. Proceedings in
volume 4 (2015) of the journal BIOMATH. Selected papers will be published
in special issues of other science journals.

International Steering Committee: R Anguelov (U. of Pretoria), Y Dumont
(CIRAD,France), J Farkas (U. of Stirling), P Hingley (European Patent
Office), P Hinow (U. of Wisconsin-Milwaukee), H Kojouharov (U. of Texas
at Arlington), J Lubuma (U. of Pretoria), S Markov (IMI-BAS), N Pesheva
(IMech-BAS), MR Roussel (U. of Lethbridge), S Schnell (U. of Michigan)

More information: www.biomath.bg/2015


----------------------------------------------------

From: <keystonesymposia@keystonesymposia.org>
Date: Sun, Sep 28, 2014 at 7:37 PM
Subject: Scholarships Available for Keystone Symposia Plant Biology Conferences

See

http://www.keystonesymposia.org/views/Web/Marketing/Emails/2015_Plant_Email.html


----------------------------------------------------

From: Vitaly V. Ganusov <vitaly.ganusov@gmail.com>
Date: Wed, Sep 24, 2014 at 10:33 AM
Subject: Postdoctoral Position, Modelling Dynamics of Infectious Diseases ...

Postdoctoral Position on modelling the dynamics of infectious diseases and
immune responses

Department of Microbiology, University of Tennessee, Knoxville

A post-doctoral position is available in the laboratory of Vitaly V. Ganusov
in the Department of Microbiology at the University of Tennessee in Knoxville
in the area of modeling within-host dynamics of viral infections and immune
responses. Our laboratory is currently focuses on studying the role of T
cell responses, mainly CD8 T cell responses, in the control of pathogens in
mammalian hosts. Despite great advances in biology and medicine in controlling
infectious diseases with antibiotics/antivirals and vaccines we still have a
limited understanding how pathogens cause the disease and how immune responses
control pathogen growth within the host. Great insights have been gained
into the dynamics of human immunodeficiency virus in infected patients by
combining analysis of experimental data with mathematical models. In our
laboratory we adopt a similar philosophy and by combining experimental
data with mathematical models we investigate CD8 T cell involvement in
control of the dynamics of infections in mice and humans. Currently,
we investigate the within-host dynamics of several major human pathogens
such as HIV, influenza, malaria, and TB. For all these pathogens we are
interested in understanding how immune response is controlling pathogen
replication and whether this control can be improved therapeutically (by
prophylactic or therapeutic vaccination, adoptive transfer, treatment). In
particular, we investigate the role of CD8 T cell response in early control
of HIV replication and likelihood of viral escape from T cell immunity,
the contribution of immunity to control of influenza replication in humans,
how vaccine-induced memory T cells provide protection against malaria, and
how Mycobacterium tuberculosis replicates in the murine and human hosts. Most
of our projects involve experimental data from collaborators in the US,
Australia, and Europe.

Requirements: PhD (or equivalent) in mathematics, biology, physics or
similar area. Previous experience in mathematical/computational biology
is required. Knowledge of one of a higher level programming languages (R,
python, Matlab, Mathematica or similar) is desired. Basic understanding of
infectious disease biology is a plus.

Position starts Jan 1st 2015 for 1 year with a possibility of extensions
given availability of funds.

Salary is on the NIH scale with full University of Tennessee employee
fringe benefits.

To apply, please send your CV and arrange 3 letters of reference to be sent
to vitaly.ganusov@gmail.com.


----------------------------------------------------

From: Smith, Amber <Amber.Smith@stjude.org>
Date: Thu, Sep 25, 2014 at 12:10 PM
Subject: Postdoctoral Position, Infectious Disease Modeling, St. Jude

Postdoctoral Research Associate in Infectious Disease Modeling

Department of Infectious Diseases, St. Jude Children's Research Hospital,
Memphis, TN

Job Description:
The Department of Infectious Diseases is recruiting a postdoctoral fellow
interested in mathematical/computational modeling of viral infections,
bacterial infections, and host immune responses in the laboratory of Amber
Smith. The candidate will develop and analyze dynamical models and use
parameter estimation to investigate experimental kinetic data, help develop
new experiments, and generate new hypotheses about the biology of influenza
infections and coinfections. The individual will pursue interdisciplinary
research at the boundary of mathematics and biology, with activities that
include directly working with experimentalists within the laboratory and
the department, publishing results in peer-reviewed journals, and presenting
results at conferences.

Job Qualifications:
Candidates should have a PhD in applied mathematics, mathematical biology,
computer or computational science, physics (or other related field) with some
knowledge of biology and experience in modeling and analyzing biological data.
Candidates should have strong mathematical and statistical skills, and an
interest in viral dynamics, bacterial dynamics, and/or immunology. Preference
will be given to candidates with previous research experience in these areas,
good programming skills (e.g. Matlab, R, Python) and excellent written and
oral English.

Salary & Benefits:
Salary and benefits will be commensurate with experience and offered according
to St. Jude and NIH guidelines. St. Jude offers an above-average benefits
package to postdoctoral fellows including health and dental insurance; group
life insurance; liability insurance; workers compensation; accidental death
and dismemberment eligibility; short term/long term disability eligibility;
a professional development account; paid holidays; paid vacation plus two
personal days per year; and paid sick leave.

Applications:
The position is available immediately (start date negotiable) and applications
will be accepted until the position is filled. Applications should be
submitted at:
https://jobs.stjude.org/css_apo_postdoc/CSSPage_Referred.ASP?Req=32753

For more information, contact Amber Smith (email: amber.smith@stjude.org) or
visit www.stjude.org/academic-programs


----------------------------------------------------

From: Carolyn Wildsmith <carolyn.wildsmith@newcastle.ac.uk>
Date: Thu, Sep 25, 2014 at 9:54 AM
Subject: Postdoctoral Position/Senior Modeller, Newcastle University

On behalf of Professor Tom Curtis I wish to make you aware of a EPSRC
Modeller post currently being advertised at Newcastle University.  This post
will join the (5 year/£5.5million) EPSRC Frontier Project - NUFEB.

Closing date 23 October.

The link to the post is:
https://www15.i-grasp.com/fe/tpl_newcastle02.asp?s=4A515F4E5A565B1A&jobid=54946,3423712382&key=83995518&c=764654951402&pagestamp=sexcpjsrycmweehqmt

If you would like more information about the NUFEB project please take a
look at our website: http://research.ncl.ac.uk/nufeb/


----------------------------------------------------

From: Hiroshi Nishiura <nishiurah@m.u-tokyo.ac.jp>
Date: Fri, Sep 26, 2014 at 4:18 AM
Subject: Research Assistant Professor & Postdoctoral Research Fellow, U Tokyo

Research Assistant Professor and Postdoctoral Research Fellow in theoretical
epidemiology of infectious diseases (Graduate School of Medicine, The
University of Tokyo, Tokyo)

Starting Date: Preferably April 2015 (negotiable)

Job details: Infectious Disease Epidemiology Unit, School of International
Health, Graduate School of Medicine, The University of Tokyo invites
applications for Research Assistant Professor and Postdoctoral Research
Fellow positions in theoretical epidemiology of infectious diseases. We are
looking for candidates with strong interests and demonstrated expertise
in mathematical modeling in epidemiology or statistical analysis of big
epidemic data.

The successful candidate will work on mathematical modeling studies of
detecting premonitory signs of emerging epidemic or short-term forecasting,
analyzing empirical datasets and implementing analytical and numerical
studies. In particular, he/she will work on (i) epidemiological modeling
using both epidemiological and genetic data and (ii) forecasting model
using human mobility and climatic data. Whereas the main focus will be
on mathematical modeling studies, the successful candidate will also have
opportunities to be engaged in quantitative modeling studies and analyze
various empirical datasets of infectious diseases.

Applicants should possess PhD degree in a related area or have an equivalent
track record in research. He/she should also possess outstanding record
of peer-reviewed publications in international journals, and sufficient
background in applied mathematics, statistics, stochastic process or computer
science to conduct project studies with senior researchers.

The salary will commensurate with the candidate's qualifications and
experience.  The position is for an initial fixed-term for up to three
years. Re-engagement thereafter is subject to mutual agreement. Health and
medical insurance is provided.

The University of Tokyo is the leading research institute in Japan. Infectious
disease epidemiology unit handles a variety of mathematical modeling subjects
aiming to improve our understanding in the transmission and persistence of
infectious diseases and offer practical insights into infectious disease
epidemiology including optimal intervention strategies.

Applications and Contact information: For details of the position,
please contact Dr Hiroshi Nishiura, by phone: +81 3 5841 3688, or email:
nishiurah(at)m.u-tokyo.ac.jp


----------------------------------------------------

From: <jmwojdak@radford.edu>
Date: Tue, 30 Sep 2014 03:18:04 +1300
Subject: Postdoctoral Position, Mathematical Biology Education, QUBES Project

Postdoctoral Position in Mathematical Biology Education

A postdoctoral position is available in partnership with the
Quantitative Undergraduate Biology Education and Synthesis (QUBES) project
(www.qubeshub.org ), with investigators at the University of Pittsburgh,
North Carolina State University, Radford University, the College of William
and Mary, Roanoke College, Unity College, and the BioQUEST Curriculum
Consortium (http://bioquest.org ).

Project: In brief, the project aims to facilitate greater penetration of
quantitatively rigorous curriculum and experiences in undergraduate biology
programs across the country. As part of the larger project, QUBES will
develop and support Faculty Mentoring Networks that partner small groups
of faculty who wish to incorporate more quantitative approaches in their
teaching with a mentor who has expertise and experience doing just that. The
focal idea is to provide support, guidance, and faculty development during the
implementation and assessment of curricular change rather than just before.
Read more about the Faculty Mentoring Networks and the larger project here:
www.qubeshub.org .

Position: The new postdoctoral research position, funded by a grant from the
National Science Foundation, will be involved in curriculum development,
faculty development, web communications, and assessment as part of
the QUBES Faculty Mentoring Networks. The position will include teaching
responsibilities in the Department of Biology at Radford University, providing
opportunities for implementing and assessing innovative curriculum first-hand.
The work will be supervised most directly by Dr. Jeremy M. Wojdak at Radford
University, but will include close interactions with the Project Director,
Dr.  Sam Donovan at the University of Pittsburgh, and Dr. Kristin Jenkins,
the Executive Director of BioQUEST.

Qualifications/ Requirements: Applicants must have a Ph.D. in the biological
sciences or a related field, preferably including experience/expertise
in biological mathematics or statistics. Preference will be given to
applicants that have demonstrated a strong interest in undergraduate STEM
education.  Indications of interest in STEM education include participation
in professional development programs (e.g., FIRST IV, HHMI Teaching Fellows
program, or participation in CIRTL, or coursework in education/pedagogy),
experience with outreach (e.g., GK12 project, directing REU program or
summer program for high school students), or publications on undergraduate
education projects.

We desire applications with strong verbal and written communication skills,
good social and organizational skills, and a robust work ethic. Familiarity
with statistics (R or equivalent) and the analysis of educational or program
assessment data is desirable, as is experience working with diverse faculty
and student populations.

Benefits and Opportunities: This is an excellent opportunity for a recent
Ph.D. with career interests in science education ? by the nature of the
mentoring network project, the postdoctoral researcher will have frequent
opportunities to connect and interact with a wide swath of faculty interested
in quantitative biology education across the country. This position will
allow the postdoctoral researcher to gain meaningful teaching experience
and robust professional development as an instructor. The project team has
a wealth of experience in STEM education pedagogy, scientific publishing,
and grant writing, and training in these areas will be available.

Salary will be $42,000 per year, and includes Radford University?s competitive
benefit package. Funding for this position is available for four years. The
candidate will initially be hired for one year, with annual extensions
possible, contingent on performance. Grant funding will provide support
for travel to conferences and project team meetings.

Radford University is a comprehensive, midsize public university nestled in
the New River Valley along the foothills of the Blue Ridge Mountains. Radford
provides a diversity of outstanding undergraduate and graduate academic
programs for approximately 10,000 students. Renowned for teaching excellence
and a focus on strong faculty/student bonds, the innovative use of technology
in the learning environment and a vibrant student life on a beautiful campus,
Radford University offers many opportunities to engage both faculty and
students in teaching, research, and public service as scholars and citizens.
Our faculty is proud of our students and their accomplishments. We seek new
colleagues who will work to promote their development and help them pursue
their aspirations as well as contribute to our versatile and collegial
intellectual community. Additional information about the university can be
found at http://www.radford.edu. The surrounding region affords a diversity
of cultural and recreational activities along with several excellent school
systems. The university is within a few hours drive from both the Washington,
D.C., and the Charlotte, NC, areas.

Application: Questions and applications should be forwarded to Dr. Jeremy
Wojdak, Radford University, jmwojdak@radford.edu . Applications should include
a CV, a statement of research and career interests including relationships
between applicant?s interests and QUBES project goals and plans, a statement
of teaching philosophy, and the names and contact information for three
professional references. Additional materials may be requested at a later
time. The ideal starting date is Spring Semester 2015 (January); interviews
will continue until the position is filled.

Radford University is an EO/AA employer committed to diversity. All new hires
to Radford University will be subject to E-Verify beginning June 1, 2011. E-
Verify is administered by the U. S. Department of Homeland Security, USCIS-
Verification Division and the Social Security Administration and allows
participating employers to electronically verify employment eligibility.


----------------------------------------------------

From: Lars J. Olson <ljolson@umd.edu>
Date: Fri, Sep 26, 2014 at 5:17 PM
Subject: Research Associate\Educator, University of Maryland

Title: Research Associate
Functional Title: Research Educator

Position Summary/Purpose of Position:  The First-Year Innovation & Research
Experience (FIRE) is a new major initiative at the University of Maryland,
College Park. FIRE provides first-year undergraduate students research
experience, broad mentorship and social connectivity that impacts academic
success and professional development.

The Office of the Provost and Senior Vice President in collaboration with the
Department of Agricultural and Resource Economics (AREC) of the College of
Agriculture & Natural Resources is seeking a Research Associate to serve as
the Research Educator for the FIRE Achieving Resource, Environment & Energy
Sustainability innovation and research stream. The stream Research Educator
works in collaboration with the stream-affiliated faculty members (Dr. Lars
Olson, Dr. Anna Alberini and Dr. Sebastien Houde) to design and implement
the group research agenda and is responsible for all curriculum, instruction
and broad student mentorship. The Research Educator will coordinate with a
team of undergraduate peer mentors to oversee research operations including
student research progress, laboratory maintenance as well as management of
the fiscal budget. The position empowers the individual to develop a strong
portfolio of experience in curriculum development, instruction, mentorship,
leadership and research group management.

The Achieving Resource, Environment and Energy Sustainability stream has three
focus areas: analysis of natural science and socioeconomic data on biological
resources; renewable energy systems, vehicle ownership and use by Maryland
households; interventions to encourage households and small businesses
in Maryland to invest in cost-effective, energy-saving technologies. The
stream will be housed in a new AREC undergraduate research center.

Minimum Qualifications:  Ph.D. in Agricultural and Resource Economics,
Computer Science (Data Analysis and Visualization), Economics, Geography
(Geographic Information Systems), Statistics, or a related field.

Expertise working with statistical software and large data sets.

Preferences:  Expertise in data visualization, econometrics, geographic
information systems, statistics and/or survey administration. Demonstrated
commitment to excellence in undergraduate education.

Additional Information:  The Research Educator position will be supported
from January 2015 through December 2017 (3 years) contingent on positive
annual reviews (each December 2015 & 2016). The position co-reports to the
Director of First-Year Research Programs in the Office of the Provost and
Senior Vice President as well the stream affiliated faculty members Dr. Lars
Olson, Dr. Anna Alberini and Dr. Sebastien Houde.

More information about the FIRE program and the Research Educator position
is available at the FIRE website: http://fire.umd.edu/

To apply for this position please submit the following documents at
https://ejobs.umd.edu/postings/29966: a cover letter; a curriculum vitae;
a list of three professional references including names, addresses and
telephone numbers; one publication or research paper; and, a statement of
your teaching philosophy.

The position is open until filled.  For best consideration apply by October
15, 2014.


----------------------------------------------------

From: Philippe MICHEL <philippe.michel@epfl.ch>
Date: Tue, Sep 23, 2014 at 11:00 AM
Subject: Tenure-Track/Senior Positions, Stat/Comput Appl Math, EPF Lausanne

The School of Basic Sciences at the EPFL invites applications for up
to two professorial positions. The search is open to all sub-domains of
statistics and computational applied mathematics, but with a particular
interest in applications to data sciences, life sciences, optimisation,
control and inverse problems. Current EPFL-wide research initiatives include
neuroscience and materials science, and applications from mathematicians
and statisticians working in these areas are also encouraged.
We seek candidates with an outstanding research record and a strong commitment
to excellence in teaching at all levels. While appointments are foreseen
at the tenure-track assistant professor level, in exceptional cases an
appointment at a more senior level may be considered.

Substantial start-up resources and research infrastructure will be
available. We offer a highly international environment that is multi-lingual
and multi-cultural.

Applications should include a letter of motivation, curriculum vitae,
publication list, concise statement of research and teaching interests, as
well as the names and addresses (including email) of at least five referees
and should be submitted via the website:

https://academicjobsonline.org/ajo/jobs/4249

The evaluation process will start on November 1st, 2014, but later
applications may also be considered.

Further enquiries should be made to:
Prof. Philippe Michel
Chairman of the Search Committee
e-mail: appliedmath2014@epfl.ch

The School of Basic Sciences actively aims to increase the presence of women
amongst its faculty, and female candidates are strongly encouraged to apply.


----------------------------------------------------

From: Alun Lloyd <alun_lloyd@ncsu.edu>
Date: Wed, Sep 24, 2014 at 10:54 AM
Subject: Faculty Position, Applied Mathematics, NCSU

Faculty position, Applied Mathematics, NCSU

The Department of Mathematics at North Carolina State University invites
applications for one or more tenure-track position(s) beginning Fall 2015,
depending on the availability of funding. We are seeking exceptionally
well-qualified individuals with research interests compatible with those
in the department in the general area of applied mathematics. Candidates
must have a PhD in the mathematical sciences or related areas; a successful
post-doctoral experience; an outstanding research program; a commitment
to effective teaching at the undergraduate and graduate levels; and
demonstrated potential for excellence in both research and teaching. The
Department of Mathematics has strong research programs in applied and pure
mathematics. Many members of the department participate in interdisciplinary
programs and research groups. Information about the department is available
at http://www.math.ncsu.edu.

Submit your application materials at http://www.mathjobs.org/jobs/ncsu. Please
include curriculum vitae, at least three letters of recommendation, and a
description of current and planned research. For questions concerning the
position contact: math-jobs@math.ncsu.edu.

North Carolina State University is an Equal Opportunity and Affirmative Action
Employer, and welcomes all persons without regard to sexual orientation. The
College of Sciences welcomes the opportunity to work with candidates to
identify suitable employment opportunities for spouses or partners.

Priority will be given to applications received by 15 November 2014.


----------------------------------------------------

From: David Murrugarra <murrugarra@uky.edu>
Date: Mon, Sep 29, 2014 at 10:40 AM
Subject: Tenure-Track Positions, Mathematical Biology, University of Kentucky

Tenure-Track Faculty Positions Mathematical Biology

The Department of Mathematics at the University of Kentucky invites
applications for two full time faculty positions at the tenure-track
(Assistant Professor) level beginning in Fall 2015. In exceptional cases,
applicants at higher levels may be considered.  successful candidate
is expected to pursue a vigorous research program and to deliver high
quality teaching to both graduate and undergraduate students. Postdoctoral
experience is desirable, but not required. Preference will be given to
those with research interests in computational or applied mathematics. We
are particularly interested in candidates with an interest in applications
of mathematics in the biological sciences.

Applicants should have a Ph.D. degree in mathematics, applied mathematics or a
related field by the time the appointment begins and are expected to present
evidence of excellence in research and teaching. Applications should include
the standard AMS Cover Sheet for Academic Employment, a curriculum vitae,
a statement about current and future research, a statement on teaching
experience and quantitative assessments of teaching, at least three (3)
letters of reference addressing the applicant?s research, and one (1)
letter of reference addressing the applicant?s teaching. All application
materials must be submitted online at http://www.mathjobs.org/jobs/jobs/6285

Applications will be reviewed as they are received. Applications submitted
by November 15, 2014 will receive full consideration.

The University of Kentucky values diversity, is located in an increasingly
diverse geographical region, and has progressive work-life policies. The
mathematics department actively seeks qualified individuals to increase
our diversity. Members of under- represented groups are strongly encouraged
to apply.

For more information about the department, visit: http://www.math.uky.edu .


----------------------------------------------------

Subject: SMBnet Reminders

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The contents of this publication may be reproduced in whole or in part with
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End of SMB Digest
****************************************************

----------------------------------------------------